Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus str. CL10T00C06
Accession NumberNTHZ00000000.1
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine-phosphate decarboxylase involved in protein o-glycosylation | CK234_00686 | Not Available | + | 877387 - 879192 | 70210.3 |
| opine dehydrogenase involved in protein o-glycosylation | CK234_00687 | Not Available | + | 879189 - 880289 | 41186.0 |
| licd family protein involved in protein o-glycosylation | CK234_00688 | Not Available | + | 880293 - 881090 | 31802.5 |
| uncharacterized protein involved in protein o-glycosylation | CK234_00689 | Not Available | + | 881104 - 882120 | 40425.5 |
| sugar transferase, pep-cterm/epsh1 system associated involved in protein o-glycosylation | CK234_00690 | Not Available | + | 882093 - 883208 | 42944.4 |
| spore coat protein sa involved in protein o-glycosylation | CK234_00691 | Not Available | + | 883221 - 884483 | 47669.5 |
| putative glycosyltransferase involved in protein o-glycosylation | CK234_00692 | Not Available | + | 884476 - 885222 | 28692.4 |
| putative bacterial membrane protein, yfho-like | CK234_00693 | Not Available | - | 885248 - 887740 | 93092.5 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CK234_00694 | Not Available | + | 887825 - 888520 | 25510.5 |
| s-ribosylhomocysteine lyase | CK234_00695 | Not Available | + | 888532 - 889017 | 18487.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
