Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus str. CL10T00C06
Accession NumberNTHZ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-galactopyranose mutase | CK234_00395 | Not Available | + | 484217 - 485323 | 42924.6 |
| hypothetical protein | CK234_00396 | Not Available | + | 485407 - 486123 | 27429.8 |
| 3-deoxy-d-manno-octulosonic acid kinase | CK234_00397 | Not Available | + | 486139 - 486891 | 29433.6 |
| galactofuranosyl transferase glft1 | CK234_00398 | Not Available | + | 486906 - 487805 | 34450.6 |
| glycosyl transferase family 2 | CK234_00399 | Not Available | + | 488033 - 488944 | 35725.8 |
| core-2/i-branching enzyme | CK234_00400 | Not Available | + | 488944 - 489837 | 35490.9 |
| galnac-alpha-(1->4)-galnac-alpha-(1->3)- dinacbac-pp-undecaprenol alpha-1,4-n-acetyl-d-galactosaminyltransferase | CK234_00401 | Not Available | + | 489834 - 491012 | 45756.5 |
| glycosyl transferase family 2 | CK234_00402 | Not Available | - | 492098 - 493030 | 35626.8 |
| putative multidrug export atp-binding/permease protein | CK234_00403 | Not Available | - | 493032 - 494870 | 68820.3 |
| putative teichuronic acid biosynthesis glycosyltransferase, tuag-like | CK234_00405 | Not Available | + | 496490 - 497479 | 38644.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
