Phocaeicola vulgatus str. CL10T00C06

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus str. CL10T00C06 is a Gram-positive, rod-shaped bacterium that exists as single cells and is classified as an anaerobe, indicating its metabolic processes occur in the absence of oxygen. This strain is notably host-associated, suggesting a potential symbiotic relationship with its host organism. As an anaerobic bacterium, P. vulgatus str. CL10T00C06 may play a crucial role in various biochemical processes within its host, potentially contributing to gut health, nutrient absorption, or fermentation of dietary fibers. The specific habitat of this strain underscores its ecological significance, as host-associated microbes often participate in complex interactions within the microbiome, influencing both host physiology and microbial community dynamics. Understanding the traits of P. vulgatus str. CL10T00C06 enhances our knowledge of the functional diversity found in anaerobic bacteria and their contributions to the overall health of the microbiological ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus str. CL10T00C06
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus str. CL10T00C06

Accession NumberNTHZ00000000.1

Gene Summary

Adenine Count

1420826 bp

Thymine Count

1424215 bp

Guanine Count

1046299 bp

Cytosine Count

1024853 bp

Genome Length

4918368 bp

Protein-coding Genes

4025 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
outer membrane protein 40 precursorCK234_03747Not Available+4519707 - 452078038634.8
23s rrna (uridine(2479)-2'-o)-methyltransferaseCK234_03748Not Available-4521113 - 452186827943.9
putative outer membrane protein assembly factor, bama precursor-likeCK234_03749Not Available+4521970 - 452429488990.3
hypothetical proteinCK234_03750Not Available+4524311 - 45245599624.58
hypothetical proteinCK234_03751Not Available+4524612 - 452519621886.3
hypothetical proteinCK234_03752Not Available+4525658 - 45258768572.49
Trna-lysNot AvailableNot Available+4526007 - 4526082Not Available
Trna-lysNot AvailableNot Available+4526100 - 4526175Not Available
Trna-lysNot AvailableNot Available+4526197 - 4526272Not Available
putative metallo-hydrolase, yycj-likeCK234_03756Not Available-4526361 - 452716429856.9

Displaying genes 3751 – 3760 of 4110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites