Phocaeicola vulgatus str. CL10T00C06

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus str. CL10T00C06 is a Gram-positive, rod-shaped bacterium that exists as single cells and is classified as an anaerobe, indicating its metabolic processes occur in the absence of oxygen. This strain is notably host-associated, suggesting a potential symbiotic relationship with its host organism. As an anaerobic bacterium, P. vulgatus str. CL10T00C06 may play a crucial role in various biochemical processes within its host, potentially contributing to gut health, nutrient absorption, or fermentation of dietary fibers. The specific habitat of this strain underscores its ecological significance, as host-associated microbes often participate in complex interactions within the microbiome, influencing both host physiology and microbial community dynamics. Understanding the traits of P. vulgatus str. CL10T00C06 enhances our knowledge of the functional diversity found in anaerobic bacteria and their contributions to the overall health of the microbiological ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus str. CL10T00C06
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus str. CL10T00C06

Accession NumberNTHZ00000000.1

Gene Summary

Adenine Count

1420826 bp

Thymine Count

1424215 bp

Guanine Count

1046299 bp

Cytosine Count

1024853 bp

Genome Length

4918368 bp

Protein-coding Genes

4025 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna n6-adenosine threonylcarbamoyltransferaseCK234_02468Not Available-3133201 - 313422036941.3
methionine aminopeptidaseCK234_02469Not Available-3134244 - 313509831838.1
winged helix-turn-helix domain (duf2582)CK234_02470Not Available+3135335 - 31355538234.71
putative acetyltransferaseCK234_02471Not Available-3135613 - 313616420098.3
putative amino-acid metabolite efflux pumpCK234_02472Not Available-3136177 - 313708534069.1
putative glycine betaine/carnitine transport binding protein, gbuc precursor-likeCK234_02473Not Available-3137230 - 313807231666.2
opuab-like glycine betaine transport system permease proteinCK234_02474Not Available-3138075 - 313889929538.8
putative glycine betaine/carnitine transport atp-binding protein, gbua-likeCK234_02475Not Available-3138896 - 314012245636.3
nitrogen regulation protein nr(i)CK234_02476Not Available+3140424 - 314176149977.5
o-acetyl-adp-ribose deacetylaseCK234_02477Not Available-3142151 - 314277722652.4

Displaying genes 2471 – 2480 of 4110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites