Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus str. CL10T00C06
Accession NumberNTHZ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacterial alpha-l-rhamnosidase 6 hairpin glycosidase domain protein | CK234_00095 | Not Available | + | 134613 - 137369 | 104292.0 |
| polygalacturonase | CK234_00096 | Not Available | + | 137427 - 138767 | 49800.1 |
| hypothetical protein | CK234_00097 | Not Available | + | 138776 - 140116 | 49757.6 |
| putative aerobic respiration control sensor protein, arcb-like | CK234_00098 | Not Available | - | 140579 - 143716 | 119522.0 |
| putative 4-hydroxyphenylacetate catabolism regulatory protein, hpaa-like | CK234_00099 | Not Available | + | 144045 - 144881 | 32643.4 |
| putative inner membrane protein, ykgb-like | CK234_00100 | Not Available | + | 144977 - 145564 | 21136.2 |
| putative degp-like precursor periplasmic serine endoprotease | CK234_00101 | Not Available | + | 145886 - 147409 | 53839.6 |
| putative rna polymerase sigma factor, siga-like | CK234_00102 | Not Available | + | 147649 - 148509 | 32805.3 |
| hypothetical protein | CK234_00103 | Not Available | + | 148731 - 149126 | 15100.5 |
| clostripain family protein | CK234_00104 | Not Available | + | 149137 - 150399 | 46854.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
