Bacteroides thetaiotaomicron

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides thetaiotaomicron is a Gram-negative, rod-shaped bacterium that thrives as an obligate anaerobe and is classified as a chemoheterotroph, utilizing organic compounds as its energy source. This microbe is commonly found in the human gut, where it plays a crucial role in the digestion of complex carbohydrates and the synthesis of essential nutrients. As a member of the Bacteroidetes phylum, B. thetaiotaomicron is particularly adept at breaking down dietary fibers and resistant starches that are otherwise indigestible to humans. This capacity allows it to release short-chain fatty acids, which are vital for maintaining gut health and modulating the immune response. Its preference for anaerobic conditions aligns with its habitat in the intestines, where oxygen levels are low, thus enabling it to thrive in an environment that would be hostile to many other microbes. In terms of morphology, B. thetaiotaomicron is characterized by its rod shape and size, typically measuring 0.5 to 0.8 micrometers in diameter and 1.0 to 3.0 micrometers in length. The organism's Gram-negative cell wall structure, consisting of a thin peptidoglycan layer surrounded by an outer membrane, contributes to its resilience in the competitive gut environment. Beyond its role in digestion, B. thetaiotaomicron is also significant in research, particularly in the fields of microbiome studies and gut health. Its ability to interact with host immune cells and modulate inflammatory responses has garnered attention in the context of diseases such as inflammatory bowel disease (IBD) and obesity. Furthermore, the bacterium's genetic tractability makes it a valuable model organism for studying microbial interactions and metabolic pathways within the human microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides thetaiotaomicron
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides thetaiotaomicron
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides thetaiotaomicron

Accession NumberQRUV00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4524 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
arabinan endo-1%2c5-alpha-l-arabinosidaseERS852511_00001Q93HT9-368 - 229371695.8
susd family.ERS852511_00002Not Available-2329 - 413467848.8
outer membrane receptor proteins%2c mostly fe transportERS852511_00003Not Available-4160 - 7303118121.0
susd family.ERS852511_00004Not Available-7314 - 908966881.9
outer membrane receptor for ferrienterochelin and colicinsERS852511_00005Not Available-9102 - 12185116334.0
uncharacterized conserved proteinERS852511_00006Not Available-12205 - 1451483867.0
two-component system sensor histidine kinase/response regulatorERS852511_00007Not Available-14744 - 19006162660.0
endo-arabinaseERS852511_00008A5IKD4+19162 - 2070358717.1
alpha-l-arabinofuranosidaseERS852511_00009P82593+20729 - 2271174833.6
beta-xylosidaseERS852511_00010P45796+22734 - 2367835611.8

Displaying genes 1 – 10 of 10647 in total

Pathways

24 pathways

Metabolites

89 records
Metabolite IDMetabolite nameStructureCAS number
BASm0031894LPA(14:1(9Z)/0:0)C17H33O7PChemical structure of LPA(14:1(9Z)/0:0)NULL
Average380.418Da
Monoisotopic380.196390401Da
BASm0031900LPA(16:1(9Z)/0:0)C19H37O7PChemical structure of LPA(16:1(9Z)/0:0)NULL
Average408.472Da
Monoisotopic408.227690529Da
BASm0032019PA(12:0/14:0)C29H57O8PChemical structure of PA(12:0/14:0)NULL
Average564.7318Da
Monoisotopic564.379105312Da
BASm0032039PA(12:0/18:1(11Z))C33H63O8PChemical structure of PA(12:0/18:1(11Z))NULL
Average618.833Da
Monoisotopic618.426055987Da
BASm0032069PA(14:0/16:0)C33H65O8PChemical structure of PA(14:0/16:0)NULL
Average620.849Da
Monoisotopic620.441706051Da
BASm0032089PA(14:0/18:1(11Z))C35H67O8PChemical structure of PA(14:0/18:1(11Z))NULL
Average646.887Da
Monoisotopic646.457356115Da
BASm0033987PS(12:0/14:0)C32H62NO10PChemical structure of PS(12:0/14:0)NULL
Average651.819Da
Monoisotopic651.411134198Da
BASm0033995PS(12:0/18:1(11Z))C36H68NO10PChemical structure of PS(12:0/18:1(11Z))NULL
Average705.911Da
Monoisotopic705.458084392Da
BASm0034613Palmitoleyl-CoAC37H64N7O17P3SChemical structure of Palmitoleyl-CoA18198-76-0
Average1003.93Da
Monoisotopic1003.329225797Da

Displaying 81–89 of 89 metabolites