Bacteroides thetaiotaomicron

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides thetaiotaomicron is a Gram-negative, rod-shaped bacterium that thrives as an obligate anaerobe and is classified as a chemoheterotroph, utilizing organic compounds as its energy source. This microbe is commonly found in the human gut, where it plays a crucial role in the digestion of complex carbohydrates and the synthesis of essential nutrients. As a member of the Bacteroidetes phylum, B. thetaiotaomicron is particularly adept at breaking down dietary fibers and resistant starches that are otherwise indigestible to humans. This capacity allows it to release short-chain fatty acids, which are vital for maintaining gut health and modulating the immune response. Its preference for anaerobic conditions aligns with its habitat in the intestines, where oxygen levels are low, thus enabling it to thrive in an environment that would be hostile to many other microbes. In terms of morphology, B. thetaiotaomicron is characterized by its rod shape and size, typically measuring 0.5 to 0.8 micrometers in diameter and 1.0 to 3.0 micrometers in length. The organism's Gram-negative cell wall structure, consisting of a thin peptidoglycan layer surrounded by an outer membrane, contributes to its resilience in the competitive gut environment. Beyond its role in digestion, B. thetaiotaomicron is also significant in research, particularly in the fields of microbiome studies and gut health. Its ability to interact with host immune cells and modulate inflammatory responses has garnered attention in the context of diseases such as inflammatory bowel disease (IBD) and obesity. Furthermore, the bacterium's genetic tractability makes it a valuable model organism for studying microbial interactions and metabolic pathways within the human microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides thetaiotaomicron
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides thetaiotaomicron
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides thetaiotaomicron

Accession NumberQRUV00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4524 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
arabinan endo-1%2c5-alpha-l-arabinosidaseERS852511_00001Q93HT9-368 - 229371695.8
susd family.ERS852511_00002Not Available-2329 - 413467848.8
outer membrane receptor proteins%2c mostly fe transportERS852511_00003Not Available-4160 - 7303118121.0
susd family.ERS852511_00004Not Available-7314 - 908966881.9
outer membrane receptor for ferrienterochelin and colicinsERS852511_00005Not Available-9102 - 12185116334.0
uncharacterized conserved proteinERS852511_00006Not Available-12205 - 1451483867.0
two-component system sensor histidine kinase/response regulatorERS852511_00007Not Available-14744 - 19006162660.0
endo-arabinaseERS852511_00008A5IKD4+19162 - 2070358717.1
alpha-l-arabinofuranosidaseERS852511_00009P82593+20729 - 2271174833.6
beta-xylosidaseERS852511_00010P45796+22734 - 2367835611.8

Displaying genes 1 – 10 of 10647 in total

Pathways

24 pathways

Metabolites

89 records
Metabolite IDMetabolite nameStructureCAS number
BASm00188881-hexadecanoyl-sn-glycerol 3-phosphateC19H39O7PChemical structure of 1-hexadecanoyl-sn-glycerol 3-phosphateNULL
Average410.4825Da
Monoisotopic410.243340114Da
BASm00188942-Acyl-sn-glycero-3-phosphoethanolamine (N-C12:0)C17H36NO7PNot availableNULL
Average397.449Da
Monoisotopic397.222939501Da
BASm00188952-Acyl-sn-glycero-3-phosphoethanolamine (N-C14:0)C19H40NO7PNot availableNULL
Average425.503Da
Monoisotopic425.25423963Da
BASm00188972-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)C21H44NO7PChemical structure of 2-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)NULL
Average453.5503Da
Monoisotopic453.285539279Da
BASm00188992-Acyl-sn-glycero-3-phosphoethanolamine (N-C18:0)C23H48NO7PChemical structure of 2-Acyl-sn-glycero-3-phosphoethanolamine (N-C18:0)NULL
Average481.6035Da
Monoisotopic481.316839407Da
BASm00189012-Acyl-sn-glycero-3-phosphoglycerol (N-C14:0)C20H40O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C14:0)NULL
Average455.5Da
Monoisotopic455.24099439Da
BASm00189022-Acyl-sn-glycero-3-phosphoglycerol (N-C14:1)C20H38O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C14:1)NULL
Average453.4841Da
Monoisotopic453.225344326Da
BASm00189032-Acyl-sn-glycero-3-phosphoglycerol (N-C16:0)C22H44O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C16:0)NULL
Average483.5531Da
Monoisotopic483.272294518Da
BASm00189042-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)C22H42O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)NULL
Average481.5372Da
Monoisotopic481.256644454Da
BASm00189052-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)C24H48O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)NULL
Average511.6063Da
Monoisotopic511.303594646Da

Displaying 41–50 of 89 metabolites