Aggregatibacter aphrophilus

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Aggregatibacter

Description

Aggregatibacter aphrophilus is a gram-negative, rod-shaped bacterium classified as a facultative anaerobe and a chemoheterotroph, showing optimal growth at human body temperature (37°C). This microbe is commonly found in various locations in the human body, including the oropharynx, respiratory tract, and dental plaque, highlighting its association with both healthy and diseased states. As a gram-negative organism, Aggregatibacter aphrophilus has a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, contributing to its pathogenic potential and role in the human microbiota. Its rod-like shape enables it to colonize surfaces effectively, forming biofilms that can be detrimental in certain infections. The classification as a facultative anaerobe allows A. aphrophilus to thrive in both oxygen-rich and oxygen-poor environments, making it versatile in various host tissues. As a chemoheterotroph, it derives energy from organic compounds, which it metabolizes to support its growth and functions. This metabolic flexibility is particularly advantageous in the dynamic environments of the human body, where nutrient availability can fluctuate. Aggregatibacter aphrophilus is known for its involvement in several clinical conditions, including periodontitis, endocarditis, and respiratory infections. Its role in periodontal disease underscores its capacity to interact with other oral pathogens and contribute to biofilm formation on dental surfaces. Additionally, this microbe has been found to exhibit symbiotic relationships with other bacteria, enhancing its influence within polymicrobial communities. Its ability to adapt to various ecological niches in the human body underscores its significance in both health and disease. Researchers continue to study A. aphrophilus to uncover its complexities and implications in microbiome research and infectious disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusAggregatibacter
SpeciesAggregatibacter aphrophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aggregatibacter aphrophilus
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Aggregatibacter aphrophilus

Accession NumberQEQC00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2156 genes

Non-Coding Genes

180 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+800603 - 800615Not Available
Hypothetical proteinDPV99_03650Not Available-805035 - 80536712173.3
hypothetical proteinDPV99_03655Not Available-805371 - 80605125269.8
hypothetical proteinDPV99_03660Not Available-806053 - 80643914393.9
Host specificity protein jDPV99_03665Not Available-806436 - 810506147307.0
Tail assembly protein iDPV99_03670Not Available-810569 - 81107518170.4
Minor tail protein kDPV99_03675Not Available-811105 - 81186629406.9
Minor tail protein lDPV99_03680Not Available-811866 - 81260327025.9
hypothetical proteinDPV99_03685Not Available-812673 - 81301413623.4
Hypothetical proteinDPV99_03690Not Available-813058 - 81359119890.9

Displaying genes 1 – 10 of 2336 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017778PE(12:0/16:1(9Z))C33H64NO8PChemical structure of PE(12:0/16:1(9Z))NULL
Average633.848Da
Monoisotopic633.436955023Da
BASm0017781PE(12:0/18:1(11Z))C35H68NO8PChemical structure of PE(12:0/18:1(11Z))NULL
Average661.902Da
Monoisotopic661.468255152Da
BASm0018523CDP-DG(12:0/14:0)C38H69N3O15P2Chemical structure of CDP-DG(12:0/14:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018525CDP-DG(12:0/16:0)C40H73N3O15P2Chemical structure of CDP-DG(12:0/16:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0018526CDP-DG(12:0/16:1(9Z))C40H71N3O15P2Chemical structure of CDP-DG(12:0/16:1(9Z))NULL
Average895.962Da
Monoisotopic895.436042594Da
BASm0018533CDP-DG(14:0/16:0)C42H77N3O15P2Chemical structure of CDP-DG(14:0/16:0)NULL
Average926.032Da
Monoisotopic925.482992787Da
BASm0018559CDP-DG(16:1(9Z)/18:1(9Z))C46H81N3O15P2Chemical structure of CDP-DG(16:1(9Z)/18:1(9Z))NULL
Average978.108Da
Monoisotopic977.514292916Da
BASm00188761-Acyl-sn-glycero-3-phosphoethanolamine (N-C12:0)C17H36NO7PNot availableNULL
Average397.449Da
Monoisotopic397.222939501Da
BASm00188771-Acyl-sn-glycero-3-phosphoethanolamine (N-C14:0)C19H40NO7PChemical structure of 1-Acyl-sn-glycero-3-phosphoethanolamine (N-C14:0)NULL
Average425.4972Da
Monoisotopic425.254239151Da
BASm00188791-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)C21H44NO7PChemical structure of 1-Acyl-sn-glycero-3-phosphoethanolamine (N-C16:0)NULL
Average453.5503Da
Monoisotopic453.285539279Da

Displaying 21–30 of 83 metabolites