Histophilus somni str. UOC-EPH-KLM-08

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-08 is a Gram-negative, rod-shaped bacterium that demonstrates both aerobic and facultative anaerobic growth capabilities. This microbe thrives optimally at a temperature of 35.0°C, suggesting a preference for conditions typically found in warm-blooded hosts. Its habitat is primarily host-associated, indicating a close relationship with its environmental niche within living organisms. The dual oxygen requirement of H. somni str. UOC-EPH-KLM-08 allows it to adapt to varying oxygen levels within host tissues, which can be crucial for survival in different physiological environments. This flexibility may enhance its ability to colonize diverse niches within the host, reflecting its potential role in host-associated microbiomes. Given its specific growth temperature and habitat, H. somni str. UOC-EPH-KLM-08 may occupy a significant ecological role in the microbiota of its host, contributing to the complex interactions within the microbial community. Understanding the characteristics of this strain can provide insights into its potential functional roles in health and disease dynamics within host organisms, particularly in the context of microbial ecology and host interactions. Further research may elucidate its specific contributions to the host microbiome and overall host health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni str. UOC-EPH-KLM-08

Accession NumberSSCM00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1787 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinE5361_06340Not Available-1349594 - 135003116772.8
hypothetical proteinE5361_06345Not Available-1350028 - 135031210954.2
Putative antirepressor protein antE5361_06350Not Available-1350399 - 135087818263.0
Possible bacteriophage antirepressorE5361_06355Not Available-1350903 - 135123513267.9
hypothetical proteinE5361_06360Not Available+1351522 - 135222026608.6
Orf014E5361_06365Not Available-1352424 - 135325431936.3
Dna-damage-inducible protein dE5361_06370Not Available-1353386 - 135413228075.1
hypothetical proteinE5361_06375Not Available-1354326 - 135481418891.5
hypothetical proteinE5361_06380Not Available+1355028 - 13552166824.93
hypothetical proteinE5361_06385Not Available-1355562 - 13558289968.07

Displaying genes 61 – 70 of 1987 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

462 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 462 metabolites