Histophilus somni str. UOC-EPH-KLM-014

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-014 is a Gram-negative, rod-shaped bacterium with an optimal growth temperature of 35.0°C. This strain is classified as a facultative anaerobe, indicating its capability to thrive in both aerobic and anaerobic environments, though it preferentially utilizes oxygen when available. H. somni is primarily host-associated, suggesting a close relationship with its biological hosts, which may influence its physiological adaptations and survival strategies. The combination of its rod shape and metabolic flexibility allows it to colonize various niches within host organisms, potentially utilizing different metabolic pathways depending on the availability of oxygen and other environmental conditions. The ecological role of H. somni str. UOC-EPH-KLM-014 may involve interactions with the host's microbiota or immune system, providing insights into its potential contributions to the host's health and disease dynamics. Understanding these traits can facilitate further studies on H. somni's biology and its interactions within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni str. UOC-EPH-KLM-014

Accession NumberSUKB00000000.1

Gene Summary

Adenine Count

694212 bp

Thymine Count

705085 bp

Guanine Count

415406 bp

Cytosine Count

414185 bp

Genome Length

2228888 bp

Protein-coding Genes

1895 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Trna-glyNot AvailableNot Available+791381 - 791456Not Available
methionine biosynthesis plp-dependent proteinFAZ28_04050Not Available+791771 - 79288041014.2
thioredoxinFAZ28_04055Not Available+793045 - 79336811771.2
dnaa regulatory inactivator hdaFAZ28_04060Not Available-793486 - 79418126473.9
uracil permeaseFAZ28_04065Not Available-794268 - 79550943001.6
uracil phosphoribosyltransferaseFAZ28_04070Not Available-795611 - 79623722579.8
nadp-specific glutamate dehydrogenaseFAZ28_04080Not Available-797397 - 79874648598.1
hypothetical proteinFAZ28_04085Not Available+799151 - 79962417091.5
Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacgaNot AvailableNot Available+799750 - 800116Not Available
beta-glucuronidaseFAZ28_04095Not Available-800434 - 80222468438.5

Displaying genes 841 – 850 of 2057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites