Histophilus somni str. UOC-EPH-KLM-014

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-014 is a Gram-negative, rod-shaped bacterium with an optimal growth temperature of 35.0°C. This strain is classified as a facultative anaerobe, indicating its capability to thrive in both aerobic and anaerobic environments, though it preferentially utilizes oxygen when available. H. somni is primarily host-associated, suggesting a close relationship with its biological hosts, which may influence its physiological adaptations and survival strategies. The combination of its rod shape and metabolic flexibility allows it to colonize various niches within host organisms, potentially utilizing different metabolic pathways depending on the availability of oxygen and other environmental conditions. The ecological role of H. somni str. UOC-EPH-KLM-014 may involve interactions with the host's microbiota or immune system, providing insights into its potential contributions to the host's health and disease dynamics. Understanding these traits can facilitate further studies on H. somni's biology and its interactions within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni str. UOC-EPH-KLM-014

Accession NumberSUKB00000000.1

Gene Summary

Adenine Count

694212 bp

Thymine Count

705085 bp

Guanine Count

415406 bp

Cytosine Count

414185 bp

Genome Length

2228888 bp

Protein-coding Genes

1895 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transcriptional regulator lsrrFAZ28_01835Not Available-386250 - 38720935351.2
autoinducer 2 abc transporter atp-binding protein lsraFAZ28_01840Not Available+387426 - 38893455531.2
autoinducer 2 abc transporter permease lsrcFAZ28_01845Not Available+388943 - 38994135329.7
autoinducer 2 import system permease lsrdFAZ28_01850Not Available+389938 - 39092134617.7
autoinducer 2 abc transporter substrate-binding protein lsrbFAZ28_01855Not Available+391034 - 39205336733.1
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolaseFAZ28_01860Not Available+392072 - 39295031764.3
(4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomeraseFAZ28_01865Not Available+393016 - 39331812231.7
hypothetical proteinFAZ28_01870Not Available+393311 - 39402126689.5
30s ribosomal protein s10FAZ28_01875Not Available+394283 - 39459411767.3
50s ribosomal protein l3FAZ28_01880Not Available+394611 - 39523722502.2

Displaying genes 511 – 520 of 2057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites