Histophilus somni str. UOC-EPH-KLM-014

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-014 is a Gram-negative, rod-shaped bacterium with an optimal growth temperature of 35.0°C. This strain is classified as a facultative anaerobe, indicating its capability to thrive in both aerobic and anaerobic environments, though it preferentially utilizes oxygen when available. H. somni is primarily host-associated, suggesting a close relationship with its biological hosts, which may influence its physiological adaptations and survival strategies. The combination of its rod shape and metabolic flexibility allows it to colonize various niches within host organisms, potentially utilizing different metabolic pathways depending on the availability of oxygen and other environmental conditions. The ecological role of H. somni str. UOC-EPH-KLM-014 may involve interactions with the host's microbiota or immune system, providing insights into its potential contributions to the host's health and disease dynamics. Understanding these traits can facilitate further studies on H. somni's biology and its interactions within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni str. UOC-EPH-KLM-014

Accession NumberSUKB00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1895 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpfFAZ28_00860Not Available+199846 - 20126452821.6
tryptophan synthase subunit betaFAZ28_00865Not Available+201274 - 20247043409.6
tryptophan synthase subunit alphaFAZ28_00870Not Available+202470 - 20327929194.2
carbonate dehydrataseFAZ28_00875Not Available+203389 - 20408126118.3
5-(carboxyamino)imidazole ribonucleotide synthaseFAZ28_00880Not Available+204124 - 20521241514.3
aspartate/tyrosine/aromatic aminotransferaseFAZ28_00885Not Available+205362 - 20655244293.6
tigr01619 family proteinFAZ28_00890Not Available-206607 - 20745832826.7
exodeoxyribonuclease iiiFAZ28_00895Not Available-207397 - 20820031470.3
4-hydroxy-tetrahydrodipicolinate reductaseFAZ28_00900Not Available-208358 - 20917029194.9
hypothetical proteinFAZ28_00905Not Available-209191 - 20982023226.9

Displaying genes 321 – 330 of 2057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites