Histophilus somni str. UOC-EPH-KLM-014

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-014 is a Gram-negative, rod-shaped bacterium with an optimal growth temperature of 35.0°C. This strain is classified as a facultative anaerobe, indicating its capability to thrive in both aerobic and anaerobic environments, though it preferentially utilizes oxygen when available. H. somni is primarily host-associated, suggesting a close relationship with its biological hosts, which may influence its physiological adaptations and survival strategies. The combination of its rod shape and metabolic flexibility allows it to colonize various niches within host organisms, potentially utilizing different metabolic pathways depending on the availability of oxygen and other environmental conditions. The ecological role of H. somni str. UOC-EPH-KLM-014 may involve interactions with the host's microbiota or immune system, providing insights into its potential contributions to the host's health and disease dynamics. Understanding these traits can facilitate further studies on H. somni's biology and its interactions within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni str. UOC-EPH-KLM-014

Accession NumberSUKB00000000.1

Gene Summary

Adenine Count

694212 bp

Thymine Count

705085 bp

Guanine Count

415406 bp

Cytosine Count

414185 bp

Genome Length

2228888 bp

Protein-coding Genes

1895 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
diaminopimelate decarboxylaseFAZ28_06460Not Available+1341293 - 134254646559.1
sodium-dependent transporterFAZ28_06465Not Available+1342813 - 134432154899.7
methionine/alanine import family nss transporter small subunitFAZ28_06470Not Available+1344324 - 13444163316.43
tfox/sxy family dna transformation proteinFAZ28_06475Not Available-1344856 - 134557227430.1
filamentous hemagglutinin n-terminal domain-containing proteinFAZ28_06480Not Available-1345969 - 1353195264897.0
shlb/fhac/hecb family hemolysin secretion/activation proteinFAZ28_06485Not Available-1353220 - 135498066405.0
na+/h+ antiporter family proteinFAZ28_06490Not Available+1355325 - 135668347385.8
hypothetical proteinFAZ28_06495Not Available+1356726 - 135731923395.7
zf-hc2 domain-containing proteinFAZ28_06500Not Available-1357354 - 13575276926.69
sigma-70 family rna polymerase sigma factorFAZ28_06505Not Available-1357528 - 135810622495.1

Displaying genes 1311 – 1320 of 2057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites