Histophilus somni str. UOC-EPH-KLM-013

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-013 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism, allowing it to thrive in varying oxygen environments. This strain is optimally active at a temperature of 35.0°C, which is typical of the physiological conditions found in its host-associated habitat. As a member of the genus Histophilus, this bacterium is adapted to living in association with animal hosts, reflecting its potential role in the microbiota of specific wildlife or livestock species. The facultative anaerobic nature of H. somni str. UOC-EPH-KLM-013 suggests it can survive in both aerobic and anaerobic environments, which may facilitate its colonization and persistence in diverse biological niches within its host. The ability to thrive at a temperature close to that of the mammalian body indicates that this strain may have evolved mechanisms to endure host-specific challenges, further underscoring its ecological significance. Understanding the characteristics of this strain can provide insights into its interactions within the host and potential implications for host health, given the complexities of host-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni str. UOC-EPH-KLM-013

Accession NumberSSCR00000000.1

Gene Summary

Adenine Count

759889 bp

Thymine Count

757514 bp

Guanine Count

456321 bp

Cytosine Count

432615 bp

Genome Length

2406339 bp

Protein-coding Genes

2123 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribose abc transporter atp-binding protein rbsaE6A58_09160Not Available-1892413 - 189390054525.0
d-ribose pyranaseE6A58_09165Not Available-1893927 - 189434615311.4
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoE6A58_09170Not Available-1894506 - 189522527497.4
1,4-dihydroxy-2-naphthoate polyprenyltransferaseE6A58_09175Not Available+1895334 - 189623933293.3
ribonuclease e activity regulator rraaE6A58_09180Not Available+1896286 - 189678618023.3
dass family sodium-coupled anion symporterE6A58_09185Not Available+1896969 - 189835750030.2
type iii toxin-antitoxin system toxn/abiq family toxinE6A58_09190Not Available-1898521 - 189900318676.6
amino acid abc transporter substrate-binding proteinE6A58_09195Not Available+1899402 - 190018428536.2
amino acid abc transporter permeaseE6A58_09200Not Available+1900174 - 190089026558.4
amino acid abc transporter atp-binding proteinE6A58_09205Not Available+1900904 - 190165328279.5

Displaying genes 1831 – 1840 of 2317 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites