Histophilus somni str. UOC-EPH-KLM-013

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-013 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism, allowing it to thrive in varying oxygen environments. This strain is optimally active at a temperature of 35.0°C, which is typical of the physiological conditions found in its host-associated habitat. As a member of the genus Histophilus, this bacterium is adapted to living in association with animal hosts, reflecting its potential role in the microbiota of specific wildlife or livestock species. The facultative anaerobic nature of H. somni str. UOC-EPH-KLM-013 suggests it can survive in both aerobic and anaerobic environments, which may facilitate its colonization and persistence in diverse biological niches within its host. The ability to thrive at a temperature close to that of the mammalian body indicates that this strain may have evolved mechanisms to endure host-specific challenges, further underscoring its ecological significance. Understanding the characteristics of this strain can provide insights into its interactions within the host and potential implications for host health, given the complexities of host-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni str. UOC-EPH-KLM-013

Accession NumberSSCR00000000.1

Gene Summary

Adenine Count

759889 bp

Thymine Count

757514 bp

Guanine Count

456321 bp

Cytosine Count

432615 bp

Genome Length

2406339 bp

Protein-coding Genes

2123 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyridoxal phosphate-dependent aminotransferaseE6A58_09005Not Available-1858342 - 185955645392.0
isochorismate synthaseE6A58_09010Not Available+1859708 - 186099149232.1
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseE6A58_09015Not Available+1860997 - 186270363817.9
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseE6A58_09020Not Available+1862716 - 186347429326.3
transporterE6A58_09025Not Available-1863500 - 1866616112138.0
efflux rnd transporter periplasmic adaptor subunitE6A58_09030Not Available-1866638 - 186785244073.7
3-phosphoshikimate 1-carboxyvinyltransferaseE6A58_09035Not Available-1868089 - 186938747453.4
histidinol-phosphate transaminaseE6A58_09040Not Available-1869450 - 187055941560.9
3-phosphoserine/phosphohydroxythreonine transaminaseE6A58_09045Not Available-1870618 - 187169740188.5
duf496 family proteinE6A58_09050Not Available+1871887 - 187224014232.1

Displaying genes 1801 – 1810 of 2317 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites