Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Histophilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Histophilus |
| Species | Histophilus somni |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe; facultative anaerobe |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Histophilus somni str. UOC-EPH-KLM-013
Accession NumberSSCR00000000.1
Gene Summary
Adenine Count
759889 bp
Thymine Count
757514 bp
Guanine Count
456321 bp
Cytosine Count
432615 bp
Genome Length
2406339 bp
Protein-coding Genes
2123 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | E6A58_09005 | Not Available | - | 1858342 - 1859556 | 45392.0 |
| isochorismate synthase | E6A58_09010 | Not Available | + | 1859708 - 1860991 | 49232.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | E6A58_09015 | Not Available | + | 1860997 - 1862703 | 63817.9 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | E6A58_09020 | Not Available | + | 1862716 - 1863474 | 29326.3 |
| transporter | E6A58_09025 | Not Available | - | 1863500 - 1866616 | 112138.0 |
| efflux rnd transporter periplasmic adaptor subunit | E6A58_09030 | Not Available | - | 1866638 - 1867852 | 44073.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | E6A58_09035 | Not Available | - | 1868089 - 1869387 | 47453.4 |
| histidinol-phosphate transaminase | E6A58_09040 | Not Available | - | 1869450 - 1870559 | 41560.9 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | E6A58_09045 | Not Available | - | 1870618 - 1871697 | 40188.5 |
| duf496 family protein | E6A58_09050 | Not Available | + | 1871887 - 1872240 | 14232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.