Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf9
Accession NumberQXWI00000000.1
Gene Summary
Adenine Count
1050319 bp
Thymine Count
1053584 bp
Guanine Count
958009 bp
Cytosine Count
947895 bp
Genome Length
4010099 bp
Protein-coding Genes
3629 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yfcl family protein | D2930_01975 | Not Available | + | 410109 - 410372 | 9557.26 |
| nad(p)h-dependent oxidoreductase | D2930_01980 | Not Available | + | 410597 - 411124 | 18411.7 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D2930_01985 | Not Available | - | 411203 - 413227 | 74795.1 |
| beta-ketoacyl-acp synthase i | D2930_01990 | Not Available | + | 413345 - 414556 | 42572.7 |
| 4-phosphoerythronate dehydrogenase | D2930_01995 | Not Available | + | 414742 - 415905 | 42589.5 |
| aspartate-semialdehyde dehydrogenase 2 | D2930_02000 | Not Available | + | 415889 - 416902 | 37361.3 |
| transcriptional repressor | D2930_02005 | Not Available | - | 416984 - 417436 | 16913.1 |
| duf4442 domain-containing protein | D2930_02010 | Not Available | + | 417802 - 418302 | 19441.4 |
| lysr family transcriptional regulator | D2930_02015 | Not Available | - | 418306 - 419184 | 33712.7 |
| cida/lrga family protein | D2930_02020 | Not Available | + | 419300 - 419740 | 16761.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


