Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf9
Accession NumberQXWI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3629 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i oxidase subunit cydx | D2930_01280 | Not Available | + | 292337 - 292447 | 4232.08 |
| acyl-coa dehydrogenase | D2930_01285 | Not Available | - | 292547 - 294991 | 88888.3 |
| d-sedoheptulose 7-phosphate isomerase | D2930_01290 | Not Available | + | 295309 - 295884 | 20647.7 |
| class ii glutamine amidotransferase | D2930_01295 | Not Available | + | 295947 - 296792 | 32077.9 |
| phosphoribosylglycinamide formyltransferase | D2930_01300 | Not Available | - | 296933 - 297571 | 23344.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | D2930_01305 | Not Available | - | 297574 - 298614 | 36775.1 |
| uracil phosphoribosyltransferase | D2930_01310 | Not Available | + | 298781 - 299407 | 22681.8 |
| ggdef domain-containing protein | D2930_01315 | Not Available | + | 299638 - 301176 | 59047.4 |
| 23s rrna pseudouridine(2604) synthase rluf | D2930_01320 | Not Available | - | 301274 - 302296 | 38162.6 |
| dna endonuclease smra | D2930_01325 | Not Available | - | 302326 - 302904 | 21927.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


