Vibrio cholerae str. VcCHNf9

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae str. VcCHNf9 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain exhibits a heterotrophic mode of metabolism, utilizing organic compounds for energy. It is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. The optimal temperature for growth is around 20.0°C, suggesting a preference for cooler conditions that may reflect its ecological niche. Vibrio cholerae str. VcCHNf9 is found in diverse habitats, which can include marine and freshwater environments, as well as estuarine ecosystems. This adaptability to various habitats may play a crucial role in its survival and proliferation, especially in fluctuating environmental conditions. Given its physiological traits and habitat versatility, V. cholerae str. VcCHNf9 may contribute to the dynamic microbial communities in aquatic systems, where it could engage in complex interactions with other microorganisms. The presence of this strain in multiple environments highlights the ecological significance of Vibrio species in nutrient cycling and their potential role in shaping microbial diversity in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf9
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VcCHNf9

Accession NumberQXWI00000000.1

Gene Summary

Adenine Count

1050319 bp

Thymine Count

1053584 bp

Guanine Count

958009 bp

Cytosine Count

947895 bp

Genome Length

4010099 bp

Protein-coding Genes

3629 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
efflux rnd transporter permease subunitD2930_13140Not Available+2867345 - 2870455112847.0
low molecular weight phosphotyrosine protein phosphataseD2930_13145Not Available+2870843 - 287134919110.0
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)D2930_13150Not Available+2871591 - 287270941042.6
udp-n-acetyl-d-mannosamine dehydrogenaseD2930_13155Not Available+2872729 - 287397044504.0
serine acetyltransferaseD2930_13160Not Available+2873967 - 287452119894.3
glycosyltransferaseD2930_13165Not Available+2874518 - 287566643904.3
lipopolysaccharide biosynthesis proteinD2930_13170Not Available+2875663 - 287707252153.8
hypothetical proteinD2930_13175Not Available+2877069 - 287828945029.9
serine acetyltransferaseD2930_13180Not Available+2878300 - 287873115447.1
phenylacetate--coa ligase family proteinD2930_13185Not Available+2878731 - 288007150622.9

Displaying genes 2621 – 2630 of 3750 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites