Vibrio cholerae str. VcCHNf9

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae str. VcCHNf9 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain exhibits a heterotrophic mode of metabolism, utilizing organic compounds for energy. It is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. The optimal temperature for growth is around 20.0°C, suggesting a preference for cooler conditions that may reflect its ecological niche. Vibrio cholerae str. VcCHNf9 is found in diverse habitats, which can include marine and freshwater environments, as well as estuarine ecosystems. This adaptability to various habitats may play a crucial role in its survival and proliferation, especially in fluctuating environmental conditions. Given its physiological traits and habitat versatility, V. cholerae str. VcCHNf9 may contribute to the dynamic microbial communities in aquatic systems, where it could engage in complex interactions with other microorganisms. The presence of this strain in multiple environments highlights the ecological significance of Vibrio species in nutrient cycling and their potential role in shaping microbial diversity in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf9
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VcCHNf9

Accession NumberQXWI00000000.1

Gene Summary

Adenine Count

1050319 bp

Thymine Count

1053584 bp

Guanine Count

958009 bp

Cytosine Count

947895 bp

Genome Length

4010099 bp

Protein-coding Genes

3629 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphataseD2930_06450Not Available-1425785 - 142641723420.0
imidazole glycerol phosphate synthase subunit hisfD2930_06455Not Available-1426414 - 142718728367.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseD2930_06460Not Available-1427169 - 142790626359.4
imidazole glycerol phosphate synthase subunit hishD2930_06465Not Available-1427949 - 142856022301.0
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbD2930_06470Not Available-1428560 - 142963339884.0
histidinol-phosphate transaminaseD2930_06475Not Available-1429685 - 143072538376.4
histidinol dehydrogenaseD2930_06480Not Available-1430729 - 143202446145.3
atp phosphoribosyltransferaseD2930_06485Not Available-1432029 - 143292532936.4
na+/h+ antiporter nhac family proteinD2930_06490Not Available-1433334 - 143493556444.7
dna-binding protein h-nsD2930_06495Not Available+1435623 - 143603615162.1

Displaying genes 1301 – 1310 of 3750 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites