Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf3
Accession NumberQXWC00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | D2924_01325 | Not Available | + | 260588 - 261115 | 18411.7 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D2924_01330 | Not Available | - | 261193 - 263217 | 74756.1 |
| beta-ketoacyl-acp synthase i | D2924_01335 | Not Available | + | 263335 - 264546 | 42572.7 |
| 4-phosphoerythronate dehydrogenase | D2924_01340 | Not Available | + | 264732 - 265895 | 42602.6 |
| aspartate-semialdehyde dehydrogenase 2 | D2924_01345 | Not Available | + | 265879 - 266892 | 37377.3 |
| transcriptional repressor | D2924_01350 | Not Available | - | 266974 - 267426 | 16913.1 |
| duf4442 domain-containing protein | D2924_01355 | Not Available | + | 267792 - 268292 | 19442.4 |
| lysr family transcriptional regulator | D2924_01360 | Not Available | - | 268296 - 269174 | 33657.5 |
| type i secretion c-terminal target domain-containing protein | D2924_01365 | Not Available | + | 269182 - 277215 | 281530.0 |
| ggdef domain-containing protein | D2924_01370 | Not Available | + | 277346 - 278326 | 37605.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


