Vibrio cholerae str. VcCHNf3

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf3 is a Gram-negative, rod-shaped bacterium that exists predominantly as single cells. This strain exhibits heterotrophic growth, indicating its reliance on organic compounds as a source of energy. VcCHNf3 is classified as a facultative anaerobe, which allows it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is around 20.0 °C, suggesting a preference for cooler habitats. The strain's ability to inhabit multiple environments highlights its ecological versatility and potential adaptability to varying conditions. This trait may reflect the broader adaptability of Vibrio cholerae as a genus, which is known to inhabit diverse aquatic environments, including both freshwater and marine ecosystems. Understanding the ecological niche of VcCHNf3 could provide insights into its survival strategies and interactions within its habitats. Further investigations into its metabolic capabilities and environmental interactions may yield important information regarding its role in microbial communities and potential responses to environmental stressors.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf3
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VcCHNf3

Accession NumberQXWC00000000.1

Gene Summary

Adenine Count

1044838 bp

Thymine Count

1043475 bp

Guanine Count

933395 bp

Cytosine Count

947542 bp

Genome Length

3969379 bp

Protein-coding Genes

3570 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna topoisomeraseD2924_12060Not Available-2606050 - 260662221124.5
duf494 domain-containing proteinD2924_12065Not Available-2606632 - 260710818469.2
dna-protecting protein dpraD2924_12070Not Available-2607111 - 260822639935.2
lysm peptidoglycan-binding domain-containing proteinD2924_12075Not Available-2608226 - 260940143327.8
peptide deformylaseD2924_12080Not Available+2609493 - 261000219148.2
methionyl-trna formyltransferaseD2924_12085Not Available+2610020 - 261096734100.9
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbD2924_12090Not Available+2611023 - 261230347531.0
trk system potassium transporter trkaD2924_12095Not Available+2612365 - 261374150115.1
trkh family potassium uptake proteinD2924_12100Not Available+2613753 - 261519852396.0
duf3157 family proteinD2924_12105Not Available+2615111 - 261576724286.1

Displaying genes 2381 – 2390 of 3693 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites