Vibrio cholerae str. VcCHNf3

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf3 is a Gram-negative, rod-shaped bacterium that exists predominantly as single cells. This strain exhibits heterotrophic growth, indicating its reliance on organic compounds as a source of energy. VcCHNf3 is classified as a facultative anaerobe, which allows it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is around 20.0 °C, suggesting a preference for cooler habitats. The strain's ability to inhabit multiple environments highlights its ecological versatility and potential adaptability to varying conditions. This trait may reflect the broader adaptability of Vibrio cholerae as a genus, which is known to inhabit diverse aquatic environments, including both freshwater and marine ecosystems. Understanding the ecological niche of VcCHNf3 could provide insights into its survival strategies and interactions within its habitats. Further investigations into its metabolic capabilities and environmental interactions may yield important information regarding its role in microbial communities and potential responses to environmental stressors.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VcCHNf3


Gene Summary

Adenine Count

1044838 bp

Thymine Count

1043475 bp

Guanine Count

933395 bp

Cytosine Count

947542 bp

Genome Length

3969379 bp

Protein-coding Genes

3570 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
crp/fnr family transcriptional regulatorD2924_09105Not Available+2016230 - 201679922028.6
atp-dependent rna helicase dbpaD2924_09110Not Available-2016802 - 201818449987.3
gnat family n-acetyltransferaseD2924_09115Not Available+2018410 - 201885916866.2
dmt family transporterD2924_09120Not Available+2018862 - 201975532708.1
lysine transporter lysmD2924_09125Not Available-2019705 - 202027721894.4
fkbp-type peptidyl-prolyl cis-trans isomeraseD2924_09130Not Available+2020497 - 202111721848.1
duf2780 domain-containing proteinD2924_09135Not Available+2021253 - 202173517248.7
50s ribosomal protein l17D2924_09140Not Available-2021879 - 202226514405.5
dna-directed rna polymerase subunit alphaD2924_09145Not Available-2022292 - 202328436417.6
30s ribosomal protein s4D2924_09150Not Available-2023309 - 202392923360.4

Displaying genes 1801 – 1810 of 3693 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites