Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | D2924_09105 | Not Available | + | 2016230 - 2016799 | 22028.6 |
| atp-dependent rna helicase dbpa | D2924_09110 | Not Available | - | 2016802 - 2018184 | 49987.3 |
| gnat family n-acetyltransferase | D2924_09115 | Not Available | + | 2018410 - 2018859 | 16866.2 |
| dmt family transporter | D2924_09120 | Not Available | + | 2018862 - 2019755 | 32708.1 |
| lysine transporter lysm | D2924_09125 | Not Available | - | 2019705 - 2020277 | 21894.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D2924_09130 | Not Available | + | 2020497 - 2021117 | 21848.1 |
| duf2780 domain-containing protein | D2924_09135 | Not Available | + | 2021253 - 2021735 | 17248.7 |
| 50s ribosomal protein l17 | D2924_09140 | Not Available | - | 2021879 - 2022265 | 14405.5 |
| dna-directed rna polymerase subunit alpha | D2924_09145 | Not Available | - | 2022292 - 2023284 | 36417.6 |
| 30s ribosomal protein s4 | D2924_09150 | Not Available | - | 2023309 - 2023929 | 23360.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation



