Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf2
Accession NumberQXWB00000000.1
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | D2923_04435 | Not Available | - | 994013 - 995182 | 44555.8 |
| lapa family protein | D2923_04440 | Not Available | - | 995194 - 995475 | 10112.8 |
| integration host factor subunit beta | D2923_04445 | Not Available | - | 995614 - 995892 | 10546.7 |
| 30s ribosomal protein s1 | D2923_04450 | Not Available | - | 996181 - 997851 | 61055.4 |
| (d)cmp kinase | D2923_04455 | Not Available | - | 997960 - 998637 | 24468.6 |
| comea family dna-binding protein | D2923_04460 | Not Available | - | 998820 - 999131 | 10967.4 |
| peptidylprolyl isomerase | D2923_04465 | Not Available | - | 999266 - 1001125 | 68431.7 |
| dna-binding protein hu-beta | D2923_04470 | Not Available | - | 1001278 - 1001550 | 9366.16 |
| endopeptidase la | D2923_04475 | Not Available | - | 1001734 - 1004094 | 88050.9 |
| atp-dependent clp protease atp-binding subunit clpx | D2923_04480 | Not Available | - | 1004217 - 1005497 | 46492.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


