Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf2
Accession NumberQXWB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2923_18695 | Not Available | - | 3968067 - 3968734 | 24842.1 |
| isas1-like element is1358 family transposase | D2923_18700 | Not Available | - | 3968735 - 3969378 | 23901.4 |
| type ii toxin-antitoxin system pard family antitoxin | D2923_18705 | Not Available | + | 3969479 - 3969721 | 8965.36 |
| type ii toxin-antitoxin system rele/pare family toxin | D2923_18710 | Not Available | + | 3969718 - 3970017 | 11589.9 |
| gnat family n-acetyltransferase | D2923_18715 | Not Available | - | 3970136 - 3970600 | 18240.7 |
| gnat family n-acetyltransferase | D2923_18720 | Not Available | - | 3970696 - 3971157 | 17821.7 |
| duf3265 domain-containing protein | D2923_18725 | Not Available | - | 3971190 - 3971276 | 3069.75 |
| transketolase | D2923_18730 | Not Available | + | 3971277 - 3971844 | 19991.1 |
| hypothetical protein | D2923_18735 | Not Available | - | 3971845 - 3972260 | 14713.4 |
| c4-dicarboxylate abc transporter | D2923_18740 | Not Available | - | 3972317 - 3972400 | 3053.79 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


