Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf2
Accession NumberQXWB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridylate synthase b | D2923_02270 | Not Available | + | 501097 - 502062 | 36659.1 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | D2923_02275 | Not Available | - | 502213 - 503934 | 63459.8 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | D2923_02280 | Not Available | - | 503927 - 505714 | 65835.0 |
| thioredoxin-disulfide reductase | D2923_02285 | Not Available | - | 505834 - 506790 | 34361.7 |
| agglutination protein | D2923_02290 | Not Available | + | 507402 - 508061 | 24896.8 |
| cysteine desulfurase-like protein | D2923_02295 | Not Available | + | 508036 - 509298 | 46317.2 |
| ggdef domain-containing protein | D2923_02300 | Not Available | + | 509564 - 510889 | 50003.0 |
| vancomycin high temperature exclusion protein | D2923_02305 | Not Available | - | 510990 - 511754 | 28613.2 |
| duf3392 domain-containing protein | D2923_02310 | Not Available | - | 511727 - 512095 | 13546.1 |
| nad-dependent malic enzyme | D2923_02315 | Not Available | - | 512099 - 513787 | 62156.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


