Vibrio cholerae str. VcCHNf2

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae str. VcCHNf2 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. V. cholerae str. VcCHNf2 is heterotrophic, relying on organic compounds for energy, which underscores its adaptability in various habitats. The optimal growth temperature for this strain is around 20.0 °C, suggesting a preference for cooler environments, which may influence its ecological niches. This trait can be particularly relevant for its survival in aquatic ecosystems where temperature fluctuations are common. Given the diverse habitats that V. cholerae can inhabit, including both marine and freshwater systems, the strain's ability to adapt to varying oxygen levels and temperatures may play a crucial role in its ecological interactions and distribution. In summary, V. cholerae str. VcCHNf2 exemplifies the versatility of Vibrio species, capable of occupying multiple ecological niches while demonstrating specific physiological traits that enable its survival and proliferation under varying environmental conditions. Further research on this strain could provide insights into its ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VcCHNf2

Accession NumberQXWB00000000.1

Gene Summary

Adenine Count

1043997 bp

Thymine Count

1047915 bp

Guanine Count

948648 bp

Cytosine Count

934802 bp

Genome Length

3982175 bp

Protein-coding Genes

3542 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
outer membrane protein assembly factor bambD2923_06445Not Available-1461613 - 146277341190.0
hypothetical proteinD2923_06450Not Available-1462786 - 146340022323.2
histidine--trna ligaseD2923_06455Not Available-1463437 - 146470546931.5
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseD2923_06460Not Available-1464731 - 146586140846.3
cytoskeleton protein rodzD2923_06465Not Available-1465866 - 146694838786.6
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnD2923_06470Not Available-1467262 - 146838342082.8
nucleoside-diphosphate kinaseD2923_06475Not Available-1468557 - 146898515926.1
aminopeptidase pepbD2923_06480Not Available-1469188 - 147047746733.7
fe-s assembly protein iscxD2923_06485Not Available-1470697 - 14708917773.1
isc system 2fe-2s type ferredoxinD2923_06490Not Available-1470939 - 147127712335.5

Displaying genes 1291 – 1300 of 3638 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites