Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. NIH41
Accession NumberJIDO00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3931 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l20 | DN30_3857 | Not Available | - | 4064702 - 4065055 | 13366.5 |
| ribosomal protein l35 | DN30_3858 | Not Available | - | 4065097 - 4065291 | 7289.29 |
| translation initiation factor if-3 | DN30_3859 | Not Available | - | 4065395 - 4065784 | 15039.5 |
| threonine--trna ligase | DN30_3860 | Not Available | - | 4065950 - 4067878 | 73475.9 |
| glycine cleavage system t protein | DN30_3861 | Not Available | - | 4068171 - 4069301 | 40556.2 |
| helix-turn-helix family protein | DN30_3862 | Not Available | - | 4069545 - 4070168 | 23807.4 |
| serine hydroxymethyltransferase 2 | DN30_3863 | Not Available | + | 4070556 - 4071863 | 46883.4 |
| glycine cleavage system h protein | DN30_3864 | Not Available | + | 4071900 - 4072280 | 13932.0 |
| glycine dehydrogenase | DN30_3865 | Not Available | + | 4072424 - 4075288 | 103907.0 |
| pullulanase | DN30_3866 | Not Available | - | 4075397 - 4079002 | 132527.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


