Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. NIH41
Accession NumberJIDO00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3931 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna chaperone hfq | DN30_3807 | Not Available | + | 4009727 - 4009990 | 9769.75 |
| gtp-binding protein hflx | DN30_3808 | Not Available | + | 4010023 - 4011312 | 48779.6 |
| hflk protein | DN30_3809 | Not Available | + | 4011358 - 4012545 | 43817.2 |
| hflc protein | DN30_3810 | Not Available | + | 4012548 - 4013528 | 36931.4 |
| hypothetical protein | DN30_3811 | Not Available | + | 4013589 - 4013777 | 6721.49 |
| slyx family protein | DN30_3812 | Not Available | - | 4013818 - 4014045 | 8665.38 |
| wd domain, g-beta repeat family protein | DN30_3813 | Not Available | - | 4014048 - 4015028 | 36303.8 |
| domain amino terminal to fkbp-type peptidyl-prolyl isomerase family protein | DN30_3814 | Not Available | + | 4015168 - 4015947 | 28124.3 |
| hth domain protein | DN30_3815 | Not Available | + | 4016152 - 4016862 | 26350.6 |
| sulfurtransferase tusd | DN30_3816 | Not Available | + | 4016859 - 4017254 | 14212.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


