Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter permease | EEJ33_15775 | Not Available | + | 3366637 - 3367638 | 35066.9 |
| ribose abc transporter substrate-binding protein rbsb | EEJ33_15780 | Not Available | + | 3367693 - 3368577 | 30868.3 |
| ribokinase | EEJ33_15785 | Not Available | + | 3368716 - 3369636 | 32099.4 |
| laci family dna-binding transcriptional regulator | EEJ33_15790 | Not Available | + | 3369647 - 3370660 | 37375.2 |
| ggdef domain-containing protein | EEJ33_15795 | Not Available | + | 3370786 - 3371718 | 35821.1 |
| pepsinogen | EEJ33_15800 | Not Available | + | 3371815 - 3372963 | 43686.1 |
| glycerophosphodiester phosphodiesterase | EEJ33_15805 | Not Available | - | 3373262 - 3374317 | 39965.9 |
| glycerol-3-phosphate transporter | EEJ33_15810 | Not Available | - | 3374424 - 3375782 | 50396.7 |
| hypothetical protein | EEJ33_15815 | Not Available | - | 3375929 - 3376168 | 9281.2 |
| duf3316 domain-containing protein | EEJ33_15820 | Not Available | - | 3376206 - 3376553 | 12617.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


