Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | EEJ33_04435 | Not Available | - | 915300 - 916178 | 32780.4 |
| u32 family peptidase | EEJ33_04440 | Not Available | - | 916190 - 917203 | 37567.5 |
| bifunctional diguanylate cyclase/phosphodiesterase | EEJ33_04445 | Not Available | - | 917311 - 919365 | 77543.1 |
| scp2 domain-containing protein | EEJ33_04450 | Not Available | + | 919598 - 920125 | 19953.1 |
| n-acetyltransferase | EEJ33_04455 | Not Available | + | 920061 - 920612 | 20280.4 |
| dna polymerase iii subunit psi | EEJ33_04460 | Not Available | + | 920723 - 921130 | 15489.6 |
| ribosomal-protein-alanine n-acetyltransferase | EEJ33_04465 | Not Available | + | 921091 - 921576 | 18294.8 |
| eal domain-containing protein | EEJ33_04470 | Not Available | - | 921565 - 923622 | 77233.9 |
| peptide chain release factor 3 | EEJ33_04475 | Not Available | + | 923831 - 925420 | 59385.1 |
| atp-dependent rna helicase srmb | EEJ33_04480 | Not Available | - | 925526 - 926797 | 47713.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


