Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | + | 903031 - 903107 | Not Available |
| ribosome maturation factor rimp | EEJ33_04385 | Not Available | + | 903320 - 903775 | 16720.1 |
| transcription termination/antitermination protein nusa | EEJ33_04390 | Not Available | + | 903794 - 905281 | 54913.2 |
| translation initiation factor if-2 | EEJ33_04395 | Not Available | + | 905305 - 908001 | 98736.4 |
| 30s ribosome-binding factor rbfa | EEJ33_04400 | Not Available | + | 908102 - 908500 | 15434.7 |
| trna pseudouridine(55) synthase trub | EEJ33_04405 | Not Available | + | 908500 - 909438 | 34468.7 |
| 30s ribosomal protein s15 | EEJ33_04410 | Not Available | + | 909580 - 909849 | 10126.3 |
| polyribonucleotide nucleotidyltransferase | EEJ33_04415 | Not Available | + | 910212 - 912341 | 76628.0 |
| lipoprotein nlpi | EEJ33_04420 | Not Available | + | 912457 - 913368 | 35161.8 |
| marr family transcriptional regulator | EEJ33_04425 | Not Available | + | 913455 - 913874 | 15804.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


