Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin | EEJ33_04330 | Not Available | - | 894797 - 895816 | 36657.9 |
| transcription elongation factor grea | EEJ33_04335 | Not Available | + | 896372 - 896845 | 17424.7 |
| ribosome assembly rna-binding protein yhby | EEJ33_04340 | Not Available | - | 896923 - 897219 | 11024.7 |
| ribosomal rna large subunit methyltransferase e | EEJ33_04345 | Not Available | + | 897339 - 897968 | 23198.1 |
| atp-dependent zinc metalloprotease ftsh | EEJ33_04350 | Not Available | + | 898069 - 900024 | 71778.4 |
| dihydropteroate synthase | EEJ33_04355 | Not Available | + | 900091 - 900927 | 30450.2 |
| phosphoglucosamine mutase | EEJ33_04360 | Not Available | + | 900953 - 902293 | 47754.7 |
| hypothetical protein | EEJ33_04365 | Not Available | + | 902353 - 902535 | 6843.34 |
| preprotein translocase subunit secg | EEJ33_04370 | Not Available | + | 902550 - 902885 | 11496.9 |
| Trna-leu | Not Available | Not Available | + | 902894 - 902977 | Not Available |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


