Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EEJ33_04170 | Not Available | + | 844826 - 846175 | 49444.1 |
| atp-dependent helicase hrpb | EEJ33_04175 | Not Available | + | 846275 - 848737 | 91650.8 |
| penicillin-binding protein 1b | EEJ33_04180 | Not Available | + | 848734 - 851067 | 87379.9 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EEJ33_04190 | Not Available | + | 853856 - 856453 | 93653.6 |
| hypothetical protein | EEJ33_04195 | Not Available | + | 856608 - 856988 | 14503.0 |
| p-ii family nitrogen regulator | EEJ33_04200 | Not Available | + | 857166 - 857504 | 12379.0 |
| ammonium transporter | EEJ33_04205 | Not Available | + | 857526 - 858755 | 42969.3 |
| fe(3+) abc transporter substrate-binding protein | EEJ33_04210 | Not Available | + | 858898 - 859911 | 37552.6 |
| iron abc transporter permease | EEJ33_04215 | Not Available | + | 859995 - 861620 | 60339.1 |
| abc transporter atp-binding protein | EEJ33_04220 | Not Available | + | 861620 - 862651 | 37507.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


