Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ligase | EEJ33_03210 | Not Available | - | 659712 - 661505 | 67389.5 |
| excinuclease abc subunit uvra | EEJ33_03215 | Not Available | - | 661561 - 664383 | 104344.0 |
| utp--glucose-1-phosphate uridylyltransferase | EEJ33_03220 | Not Available | - | 664539 - 665414 | 32467.5 |
| dna-binding response regulator | EEJ33_03225 | Not Available | - | 665583 - 666227 | 24776.1 |
| single-stranded dna-binding protein | EEJ33_03230 | Not Available | + | 666519 - 667052 | 19760.1 |
| rnase e specificity factor csrd | EEJ33_03235 | Not Available | + | 667167 - 669188 | 77488.1 |
| msha biogenesis protein mshi | EEJ33_03240 | Not Available | + | 669201 - 670640 | 53374.2 |
| msha biogenesis protein mshj | EEJ33_03245 | Not Available | + | 670637 - 671287 | 24443.7 |
| msha biogenesis protein mshk | EEJ33_03250 | Not Available | + | 671280 - 671597 | 11542.1 |
| pilus (msha type) biogenesis protein mshl | EEJ33_03255 | Not Available | + | 671613 - 673289 | 59954.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


