Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | EEJ33_03010 | Not Available | + | 618419 - 619603 | 43128.9 |
| (2fe-2s)-binding protein | EEJ33_03015 | Not Available | + | 619907 - 620095 | 6883.61 |
| bacterioferritin | EEJ33_03020 | Not Available | + | 620165 - 620641 | 18448.2 |
| 30s ribosomal protein s6 | EEJ33_03025 | Not Available | + | 620853 - 621221 | 14264.2 |
| primosomal replication protein n | EEJ33_03030 | Not Available | + | 621229 - 621531 | 10868.2 |
| 30s ribosomal protein s18 | EEJ33_03035 | Not Available | + | 621547 - 621774 | 8843.77 |
| 50s ribosomal protein l9 | EEJ33_03040 | Not Available | + | 621808 - 622257 | 15641.8 |
| duf481 domain-containing protein | EEJ33_03045 | Not Available | - | 622312 - 623070 | 29097.2 |
| replicative dna helicase | EEJ33_03050 | Not Available | + | 623241 - 624647 | 52042.9 |
| alanine racemase | EEJ33_03055 | Not Available | + | 624619 - 625746 | 40957.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


