Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | EEJ33_02455 | Not Available | - | 504810 - 506198 | 53342.8 |
| mechanosensitive ion channel family protein | EEJ33_02460 | Not Available | - | 506367 - 507605 | 46853.4 |
| d-2-hydroxyacid dehydrogenase | EEJ33_02465 | Not Available | - | 507694 - 508617 | 34965.1 |
| duf416 family protein | EEJ33_02470 | Not Available | + | 508691 - 509278 | 22615.9 |
| hlyc/corc family transporter | EEJ33_02475 | Not Available | - | 509325 - 510383 | 39479.1 |
| dna-binding protein hu-alpha | EEJ33_02480 | Not Available | + | 510754 - 511026 | 9491.51 |
| duf1481 domain-containing protein | EEJ33_02485 | Not Available | + | 511027 - 511761 | 27893.1 |
| phosphoribosylamine--glycine ligase | EEJ33_02490 | Not Available | - | 511840 - 513129 | 45359.1 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EEJ33_02495 | Not Available | - | 513188 - 514795 | 57843.7 |
| phosphoribosylamine--glycine ligase | EEJ33_02500 | Not Available | - | 514871 - 515020 | 5860.34 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


