Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EEJ33_01935 | Not Available | + | 399342 - 400127 | 28300.3 |
| iron-siderophore abc transporter substrate-binding protein | EEJ33_01940 | Not Available | + | 400118 - 401077 | 35170.7 |
| fe(3+)-hydroxamate abc transporter permease fhub | EEJ33_01945 | Not Available | + | 401074 - 403035 | 69010.5 |
| sis domain-containing protein | EEJ33_01950 | Not Available | - | 403062 - 403910 | 30957.3 |
| hypothetical protein | EEJ33_01955 | Not Available | + | 403953 - 404144 | 7243.84 |
| n-acetylmuramic acid 6-phosphate etherase | EEJ33_01960 | Not Available | + | 404126 - 405043 | 31801.7 |
| pts n-acetylmuramic acid transporter subunits iibc | EEJ33_01965 | Not Available | + | 405067 - 406512 | 50336.8 |
| tigr00645 family protein | EEJ33_01970 | Not Available | - | 406618 - 407106 | 18346.0 |
| helix-turn-helix domain-containing protein | EEJ33_01975 | Not Available | - | 407680 - 408558 | 33677.8 |
| inovirus gp2 family protein | EEJ33_01980 | Not Available | + | 408947 - 409591 | 25157.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


