Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | EEJ33_01530 | Not Available | - | 316472 - 318889 | 89579.7 |
| dna replication/repair protein recf | EEJ33_01535 | Not Available | - | 318910 - 320001 | 41200.2 |
| dna polymerase iii subunit beta | EEJ33_01540 | Not Available | - | 320019 - 321119 | 40600.7 |
| chromosomal replication initiator protein dnaa | EEJ33_01545 | Not Available | - | 321177 - 322580 | 52889.1 |
| amino acid abc transporter substrate-binding protein | EEJ33_01550 | Not Available | + | 322892 - 323638 | 27338.5 |
| amino acid abc transporter permease | EEJ33_01555 | Not Available | + | 323716 - 324387 | 24921.3 |
| amino acid abc transporter atp-binding protein | EEJ33_01560 | Not Available | + | 324384 - 325121 | 27335.2 |
| 50s ribosomal protein l34 | EEJ33_01565 | Not Available | + | 325363 - 325500 | 5253.62 |
| ribonuclease p protein component | EEJ33_01570 | Not Available | + | 325513 - 325869 | 13634.5 |
| membrane protein insertion efficiency factor yidd | EEJ33_01575 | Not Available | + | 325836 - 326093 | 9616.85 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


