Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | EEJ33_01330 | Not Available | - | 279357 - 280274 | 35193.6 |
| threonylcarbamoyl-amp synthase | EEJ33_01335 | Not Available | - | 280293 - 280859 | 20263.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EEJ33_01340 | Not Available | + | 281017 - 281502 | 16675.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EEJ33_01345 | Not Available | + | 281506 - 282639 | 40959.4 |
| dna topoisomerase | EEJ33_01350 | Not Available | - | 282713 - 283279 | 20872.2 |
| duf494 domain-containing protein | EEJ33_01355 | Not Available | - | 283284 - 283760 | 18501.2 |
| dna-protecting protein dpra | EEJ33_01360 | Not Available | - | 283763 - 284878 | 39975.3 |
| lysm peptidoglycan-binding domain-containing protein | EEJ33_01365 | Not Available | - | 284878 - 286053 | 43321.7 |
| peptide deformylase | EEJ33_01370 | Not Available | + | 286145 - 286654 | 19163.1 |
| methionyl-trna formyltransferase | EEJ33_01375 | Not Available | + | 286672 - 287619 | 34113.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


