Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | EEJ33_18170 | Not Available | + | 3701798 - 3702367 | 20407.1 |
| formate transporter foca | EEJ33_18175 | Not Available | - | 3702475 - 3703926 | 52334.4 |
| lysr family transcriptional regulator | EEJ33_18180 | Not Available | + | 3704143 - 3705048 | 34115.4 |
| duf1097 domain-containing protein | EEJ33_18185 | Not Available | + | 3705210 - 3705722 | 18341.8 |
| duf2813 domain-containing protein | EEJ33_18190 | Not Available | - | 3705968 - 3707632 | 62914.0 |
| bifunctional metallophosphatase/5'-nucleotidase | EEJ33_18195 | Not Available | + | 3707861 - 3709603 | 63900.2 |
| terc/alx family metal homeostasis membrane protein | EEJ33_18200 | Not Available | + | 3710162 - 3711118 | 35817.7 |
| hypothetical protein | EEJ33_18205 | Not Available | + | 3711422 - 3711610 | 7066.63 |
| alkylphosphonate utilization protein | EEJ33_18210 | Not Available | - | 3711885 - 3712460 | 21338.7 |
| site-2 protease family protein | EEJ33_18215 | Not Available | + | 3712644 - 3713726 | 40254.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


