Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | EEJ33_16030 | Not Available | + | 3425270 - 3426145 | 33036.4 |
| nitric oxide reductase transcriptional regulator norr | EEJ33_16035 | Not Available | - | 3426142 - 3427734 | 59052.3 |
| no-inducible flavohemoprotein | EEJ33_16040 | Not Available | + | 3427925 - 3429109 | 44204.6 |
| cold-shock protein | EEJ33_16045 | Not Available | - | 3429254 - 3429463 | 7531.94 |
| alternative ribosome-rescue factor a | EEJ33_16050 | Not Available | + | 3429822 - 3430049 | 8218.0 |
| nadh:ubiquinone oxidoreductase | EEJ33_16055 | Not Available | + | 3430437 - 3430814 | 14047.4 |
| hypothetical protein | EEJ33_16060 | Not Available | + | 3431051 - 3431329 | 10756.8 |
| response regulator | EEJ33_16065 | Not Available | + | 3431416 - 3432420 | 36721.8 |
| pas domain-containing protein | EEJ33_16070 | Not Available | + | 3432420 - 3432866 | 17199.8 |
| nad(p)h-hydrate dehydratase | EEJ33_16075 | Not Available | + | 3432904 - 3434388 | 52746.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


