Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein batd | EEJ33_15975 | Not Available | - | 3411771 - 3413423 | 62053.9 |
| vwa domain-containing protein | EEJ33_15985 | Not Available | - | 3415283 - 3416239 | 35846.4 |
| duf4381 domain-containing protein | EEJ33_15990 | Not Available | - | 3416226 - 3416714 | 18555.6 |
| duf58 domain-containing protein | EEJ33_15995 | Not Available | - | 3416711 - 3417643 | 35199.5 |
| moxr family atpase | EEJ33_16000 | Not Available | - | 3417647 - 3418603 | 35421.7 |
| methyl-accepting chemotaxis protein | EEJ33_16005 | Not Available | + | 3418905 - 3420821 | 69755.0 |
| restriction endonuclease subunit s | EEJ33_16010 | Not Available | + | 3420878 - 3421081 | 7731.12 |
| dsba family protein | EEJ33_16015 | Not Available | - | 3421124 - 3421777 | 24960.9 |
| nupc/nupg family nucleoside cnt transporter | EEJ33_16020 | Not Available | + | 3422423 - 3423631 | 41941.4 |
| peptidase t | EEJ33_16025 | Not Available | + | 3423866 - 3425098 | 44906.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


