Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_15925 | Not Available | - | 3402105 - 3402305 | 7670.18 |
| universal stress protein | EEJ33_15930 | Not Available | - | 3402377 - 3403318 | 35223.5 |
| transposase | EEJ33_15935 | Not Available | - | 3403515 - 3404750 | 44236.1 |
| tryptophanase | EEJ33_15940 | Not Available | - | 3404829 - 3406247 | 52937.4 |
| tryptophanase leader peptide | EEJ33_15945 | Not Available | - | 3406631 - 3406702 | 2807.34 |
| hypothetical protein | EEJ33_15950 | Not Available | + | 3406939 - 3407148 | 7918.12 |
| hypothetical protein | EEJ33_15955 | Not Available | - | 3407218 - 3407700 | 18388.2 |
| ggdef domain-containing protein | EEJ33_15960 | Not Available | + | 3408104 - 3410239 | 81126.3 |
| cold-shock protein | EEJ33_15965 | Not Available | + | 3410485 - 3410697 | 7629.04 |
| simpl domain-containing protein | EEJ33_15970 | Not Available | - | 3410894 - 3411610 | 26556.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


