Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spindolin | EEJ33_15825 | Not Available | + | 3376961 - 3378169 | 44352.6 |
| sensor histidine kinase | EEJ33_15830 | Not Available | - | 3378283 - 3380337 | 76669.7 |
| sigma-54-dependent fis family transcriptional regulator | EEJ33_15835 | Not Available | + | 3380501 - 3381853 | 50090.5 |
| hypothetical protein | EEJ33_15840 | Not Available | + | 3381919 - 3382029 | 4212.38 |
| taxi family trap transporter solute-binding subunit | EEJ33_15845 | Not Available | + | 3382155 - 3383162 | 36013.1 |
| trap transporter permease | EEJ33_15850 | Not Available | + | 3383335 - 3385476 | 76908.2 |
| l-2-hydroxyglutarate oxidase | EEJ33_15855 | Not Available | + | 3385473 - 3386684 | 44953.6 |
| peptidase m66 | EEJ33_15860 | Not Available | + | 3387052 - 3390789 | 139108.0 |
| peptide deformylase | EEJ33_15865 | Not Available | + | 3390937 - 3391443 | 18672.5 |
| pts ascorbate transporter subunit iic | EEJ33_15870 | Not Available | - | 3391525 - 3392781 | 44113.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


