Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EEJ33_15715 | Not Available | - | 3357039 - 3358219 | 45742.0 |
| hypothetical protein | EEJ33_15725 | Not Available | + | 3359739 - 3360122 | 14096.0 |
| hypothetical protein | EEJ33_15730 | Not Available | + | 3360152 - 3360586 | 16625.8 |
| is5 family transposase | EEJ33_15735 | Not Available | + | 3360617 - 3361537 | 34925.4 |
| duf3012 domain-containing protein | EEJ33_15740 | Not Available | - | 3361703 - 3361804 | 3799.56 |
| hypothetical protein | EEJ33_15750 | Not Available | + | 3363150 - 3363422 | 10682.7 |
| hypothetical protein | EEJ33_15755 | Not Available | + | 3363511 - 3364095 | 22541.7 |
| duf3012 domain-containing protein | EEJ33_15760 | Not Available | - | 3364147 - 3364407 | 9747.54 |
| d-ribose pyranase | EEJ33_15765 | Not Available | + | 3364692 - 3365111 | 15340.6 |
| ribose import atp-binding protein rbsa | EEJ33_15770 | Not Available | + | 3365138 - 3366640 | 54411.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


