Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | EEJ33_15590 | Not Available | + | 3331173 - 3331649 | 18349.8 |
| type vi secretion system baseplate subunit tssk | EEJ33_15595 | Not Available | + | 3331656 - 3332990 | 50364.8 |
| dotu family type iv/vi secretion system protein | EEJ33_15600 | Not Available | + | 3332993 - 3333766 | 29695.6 |
| type vi secretion system atpase tssh | EEJ33_15605 | Not Available | + | 3333792 - 3336401 | 96234.1 |
| sigma-54-dependent fis family transcriptional regulator | EEJ33_15610 | Not Available | + | 3336404 - 3337996 | 59260.2 |
| type vi secretion system-associated protein tago | EEJ33_15615 | Not Available | + | 3337966 - 3338649 | 24665.5 |
| type vi secretion system protein tssa | EEJ33_15620 | Not Available | + | 3338659 - 3340068 | 53056.9 |
| type vi secretion system membrane subunit tssm | EEJ33_15625 | Not Available | + | 3340084 - 3343629 | 134746.0 |
| type vi secretion protein | EEJ33_15630 | Not Available | + | 3343677 - 3344942 | 48307.7 |
| type vi secretion system tip protein vgrg | EEJ33_15640 | Not Available | + | 3345184 - 3348159 | 109788.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


