Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | EEJ33_15535 | Not Available | + | 3318473 - 3320251 | 64415.4 |
| rlua family pseudouridine synthase | EEJ33_15540 | Not Available | - | 3320293 - 3321972 | 64210.0 |
| type vi secretion system paar protein | EEJ33_15550 | Not Available | + | 3322755 - 3323039 | 9214.9 |
| sel1 repeat family protein | EEJ33_15555 | Not Available | + | 3323023 - 3324027 | 38469.7 |
| type vi secretion system contractile sheath small subunit | EEJ33_15560 | Not Available | + | 3324460 - 3324966 | 18476.1 |
| type vi secretion system contractile sheath large subunit | EEJ33_15565 | Not Available | + | 3325007 - 3326485 | 55630.1 |
| type vi secretion system baseplate subunit tsse | EEJ33_15570 | Not Available | + | 3326488 - 3326925 | 16435.7 |
| type vi secretion system baseplate subunit tssf | EEJ33_15575 | Not Available | + | 3326931 - 3328700 | 67152.2 |
| type vi secretion system baseplate subunit tssg | EEJ33_15580 | Not Available | + | 3328664 - 3329680 | 38294.9 |
| type vi secretion system-associated fha domain protein tagh | EEJ33_15585 | Not Available | + | 3329683 - 3331170 | 54865.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


