Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EEJ33_15480 | Not Available | + | 3309379 - 3309735 | 13743.5 |
| hypothetical protein | EEJ33_15485 | Not Available | + | 3310004 - 3310702 | 26112.7 |
| endo-1,4-beta-xylanase | EEJ33_15490 | Not Available | + | 3310745 - 3311986 | 45330.3 |
| nudix hydrolase | EEJ33_15495 | Not Available | - | 3311999 - 3312715 | 26578.0 |
| hypothetical protein | EEJ33_15505 | Not Available | - | 3312930 - 3313115 | 7095.7 |
| nicotinate phosphoribosyltransferase | EEJ33_15510 | Not Available | + | 3313114 - 3314421 | 50085.2 |
| oxidoreductase | EEJ33_15515 | Not Available | + | 3314452 - 3315492 | 39056.6 |
| rhodanese-like domain-containing protein | EEJ33_15520 | Not Available | - | 3315529 - 3315900 | 13727.4 |
| eal domain-containing protein | EEJ33_15525 | Not Available | - | 3315900 - 3317456 | 58825.9 |
| had family phosphatase | EEJ33_15530 | Not Available | - | 3317633 - 3318292 | 24135.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


