Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase 2 family protein | EEJ33_15430 | Not Available | + | 3299511 - 3300869 | 51667.4 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EEJ33_15435 | Not Available | + | 3300870 - 3301343 | 17408.9 |
| hypothetical protein | EEJ33_15440 | Not Available | + | 3301354 - 3301755 | 15088.2 |
| sodium:proton antiporter | EEJ33_15445 | Not Available | - | 3301824 - 3303257 | 52311.2 |
| yjih family protein | EEJ33_15450 | Not Available | + | 3303650 - 3304381 | 25939.3 |
| hypothetical protein | EEJ33_15455 | Not Available | + | 3304378 - 3304845 | 16331.8 |
| dicarboxylate/amino acid:cation symporter | EEJ33_15460 | Not Available | - | 3305063 - 3306373 | 45798.2 |
| dmt family transporter | EEJ33_15465 | Not Available | - | 3306629 - 3307522 | 31869.8 |
| duf134 domain-containing protein | EEJ33_15470 | Not Available | + | 3307752 - 3308048 | 11011.6 |
| triacylglycerol lipase | EEJ33_15475 | Not Available | - | 3308219 - 3308848 | 23129.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


