Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3297 family protein | EEJ33_15325 | Not Available | - | 3272194 - 3272442 | 9428.25 |
| sensor domain-containing diguanylate cyclase | EEJ33_15330 | Not Available | - | 3272595 - 3273971 | 52018.4 |
| methyl-accepting chemotaxis protein | EEJ33_15335 | Not Available | + | 3274303 - 3276282 | 72724.7 |
| carbohydrate abc transporter substrate-binding protein | EEJ33_15340 | Not Available | + | 3276291 - 3277736 | 52964.9 |
| methyl-accepting chemotaxis protein | EEJ33_15345 | Not Available | - | 3277812 - 3279443 | 60292.4 |
| duf2999 family protein | EEJ33_15350 | Not Available | - | 3279742 - 3279993 | 9178.37 |
| glycogen debranching enzyme glgx | EEJ33_15355 | Not Available | - | 3280128 - 3282098 | 75105.4 |
| maltoporin | EEJ33_15360 | Not Available | + | 3282519 - 3283817 | 47077.2 |
| transcriptional regulator | EEJ33_15365 | Not Available | + | 3283880 - 3284725 | 30921.7 |
| glycogen debranching protein | EEJ33_15370 | Not Available | - | 3284967 - 3287357 | 91032.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


